Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trim42Q9D2H5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim42Q9D2H5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim42Q9D2H5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim42Q9D2H5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim42Q9D2H5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim42Q9D2H5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim42Q9D2H5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim42Q9D2H5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim42Q9D2H5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim42Q9D2H5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim42Q9D2H5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim42Q9D2H5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.58■□□□□ 0.57
Trim42Q9D2H5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim42Q9D2H5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim42Q9D2H5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim42Q9D2H5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim42Q9D2H5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim42Q9D2H5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim42Q9D2H5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms