Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim13Q9CYB0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Serp2-204ENSMUST00000228055 705 ntBASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim13Q9CYB0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.22■□□□□ 0.35
Trim13Q9CYB0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim13Q9CYB0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim13Q9CYB0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim13Q9CYB0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim13Q9CYB0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Grk6-206ENSMUST00000224995 2971 ntBASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim13Q9CYB0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim13Q9CYB0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim13Q9CYB0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms