Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd1lQ9CXF7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Chd1lQ9CXF7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1lQ9CXF7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Chd1lQ9CXF7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chd1lQ9CXF7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.07■□□□□ 0.96
Chd1lQ9CXF7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.06■□□□□ 0.96
Chd1lQ9CXF7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd1lQ9CXF7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chd1lQ9CXF7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Gm15820-201ENSMUST00000201566 728 ntBASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.03■□□□□ 0.96
Chd1lQ9CXF7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd1lQ9CXF7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1lQ9CXF7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1lQ9CXF7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chd1lQ9CXF7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1lQ9CXF7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1lQ9CXF7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1lQ9CXF7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Chd1lQ9CXF7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chd1lQ9CXF7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms