Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldnd1Q9CQX5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Gm43183-201ENSMUST00000200632 547 ntBASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldnd1Q9CQX5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cldnd1Q9CQX5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Gm21814-202ENSMUST00000203277 873 ntBASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Mtag2-201ENSMUST00000058665 714 ntBASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldnd1Q9CQX5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldnd1Q9CQX5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.18■□□□□ 0.66
Cldnd1Q9CQX5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cldnd1Q9CQX5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Gm13559-201ENSMUST00000120476 863 ntBASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldnd1Q9CQX5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Gm11539-201ENSMUST00000119837 557 ntBASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Gm13436-201ENSMUST00000120418 567 ntBASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Gm6659-201ENSMUST00000174752 547 ntBASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldnd1Q9CQX5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldnd1Q9CQX5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms