Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm6420-201ENSMUST00000193885 723 ntBASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg3Q9CQV4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Nespas-201ENSMUST00000143738 1083 ntBASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Retreg3Q9CQV4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retreg3Q9CQV4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retreg3Q9CQV4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg3Q9CQV4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retreg3Q9CQV4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg3Q9CQV4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg3Q9CQV4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms