Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Gm29257-201ENSMUST00000186115 639 ntBASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtn4rQ99PI8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtn4rQ99PI8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn4rQ99PI8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Rtn4rQ99PI8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rQ99PI8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn4rQ99PI8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rQ99PI8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms