Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b1Q99NB9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b1Q99NB9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b1Q99NB9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b1Q99NB9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b1Q99NB9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sf3b1Q99NB9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b1Q99NB9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sf3b1Q99NB9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Gm12896-201ENSMUST00000118430 226 ntBASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b1Q99NB9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3b1Q99NB9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Gm2559-201ENSMUST00000201323 363 ntBASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Gm10812-201ENSMUST00000099864 546 ntBASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b1Q99NB9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b1Q99NB9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b1Q99NB9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms