Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.58■□□□□ 0.41
Chmp1b1Q99LU0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp1b1Q99LU0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chmp1b1Q99LU0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chmp1b1Q99LU0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chmp1b1Q99LU0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Gm9988-201ENSMUST00000069786 435 ntBASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chmp1b1Q99LU0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp1b1Q99LU0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp1b1Q99LU0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chmp1b1Q99LU0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms