Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Taf11Q99JX1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Taf11Q99JX1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Taf11Q99JX1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.73■□□□□ 0.43
Taf11Q99JX1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.73■□□□□ 0.43
Taf11Q99JX1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Taf11Q99JX1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Taf11Q99JX1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Taf11Q99JX1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Taf11Q99JX1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Taf11Q99JX1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Taf11Q99JX1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Taf11Q99JX1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Taf11Q99JX1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Taf11Q99JX1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.69■□□□□ 0.42
Taf11Q99JX1 Gm14523-201ENSMUST00000117260 558 ntBASIC17.69■□□□□ 0.42
Taf11Q99JX1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.69■□□□□ 0.42
Taf11Q99JX1 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.69■□□□□ 0.42
Taf11Q99JX1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Taf11Q99JX1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.68■□□□□ 0.42
Taf11Q99JX1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.68■□□□□ 0.42
Taf11Q99JX1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Taf11Q99JX1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.68■□□□□ 0.42
Taf11Q99JX1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms