Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha11Q91Y19 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 Gm5408-201ENSMUST00000197998 747 ntBASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha11Q91Y19 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha11Q91Y19 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Iqck-206ENSMUST00000208658 2891 ntBASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha11Q91Y19 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha11Q91Y19 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha11Q91Y19 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha11Q91Y19 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha11Q91Y19 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha11Q91Y19 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha11Q91Y19 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha11Q91Y19 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms