Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhga9Q91XX9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhga9Q91XX9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhga9Q91XX9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhga9Q91XX9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhga9Q91XX9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhga9Q91XX9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdhga9Q91XX9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhga9Q91XX9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.39■□□□□ 0.54
Pcdhga9Q91XX9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhga9Q91XX9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms