Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trex1Q91XB0 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.5■■□□□ 1.03
Trex1Q91XB0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trex1Q91XB0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trex1Q91XB0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.5■■□□□ 1.03
Trex1Q91XB0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trex1Q91XB0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trex1Q91XB0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trex1Q91XB0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trex1Q91XB0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trex1Q91XB0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trex1Q91XB0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trex1Q91XB0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Gm10698-201ENSMUST00000182663 604 ntBASIC21.48■■□□□ 1.03
Trex1Q91XB0 Mir7071-201ENSMUST00000184847 69 ntBASIC21.48■■□□□ 1.03
Trex1Q91XB0 Gm18666-201ENSMUST00000190039 958 ntBASIC21.48■■□□□ 1.03
Trex1Q91XB0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trex1Q91XB0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.47■■□□□ 1.03
Trex1Q91XB0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trex1Q91XB0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Trex1Q91XB0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.45■■□□□ 1.02
Trex1Q91XB0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.45■■□□□ 1.02
Trex1Q91XB0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trex1Q91XB0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.44■■□□□ 1.02
Trex1Q91XB0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Golph3-202ENSMUST00000226517 2359 ntBASIC21.44■■□□□ 1.02
Trex1Q91XB0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trex1Q91XB0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.43■■□□□ 1.02
Trex1Q91XB0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trex1Q91XB0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trex1Q91XB0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms