Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb17Q91VD8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Gm18515-201ENSMUST00000219755 797 ntBASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb17Q91VD8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb17Q91VD8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb17Q91VD8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Gm6365-201ENSMUST00000054711 744 ntBASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb17Q91VD8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb17Q91VD8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb17Q91VD8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb17Q91VD8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb17Q91VD8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb17Q91VD8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb17Q91VD8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb17Q91VD8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.25■□□□□ 0.67
Pcdhb17Q91VD8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms