Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.09■□□□□ 0.17
Tram1Q91V04 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.09■□□□□ 0.17
Tram1Q91V04 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tram1Q91V04 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tram1Q91V04 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tram1Q91V04 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tram1Q91V04 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tram1Q91V04 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Tram1Q91V04 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tram1Q91V04 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
Tram1Q91V04 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.08■□□□□ 0.16
Tram1Q91V04 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tram1Q91V04 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tram1Q91V04 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tram1Q91V04 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.07■□□□□ 0.16
Tram1Q91V04 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.07■□□□□ 0.16
Tram1Q91V04 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tram1Q91V04 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.06■□□□□ 0.16
Tram1Q91V04 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Tram1Q91V04 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tram1Q91V04 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tram1Q91V04 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Tram1Q91V04 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Tram1Q91V04 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.05■□□□□ 0.16
Tram1Q91V04 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.05■□□□□ 0.16
Tram1Q91V04 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tram1Q91V04 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tram1Q91V04 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tram1Q91V04 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.04■□□□□ 0.16
Tram1Q91V04 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tram1Q91V04 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Tram1Q91V04 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tram1Q91V04 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.03■□□□□ 0.16
Tram1Q91V04 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tram1Q91V04 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tram1Q91V04 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Tram1Q91V04 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tram1Q91V04 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms