Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Gm9959-201ENSMUST00000068277 390 ntBASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rab40cQ8VHQ4 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40cQ8VHQ4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rab40cQ8VHQ4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40cQ8VHQ4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Rps24-207ENSMUST00000224568 714 ntBASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40cQ8VHQ4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rab40cQ8VHQ4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Rab40cQ8VHQ4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms