Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab40bQ8VHP8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Gm5812-201ENSMUST00000061073 957 ntBASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.78■□□□□ 0.28
Rab40bQ8VHP8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Gm15546-201ENSMUST00000122095 826 ntBASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab40bQ8VHP8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rab40bQ8VHP8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Gm9959-201ENSMUST00000068277 390 ntBASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rab40bQ8VHP8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab40bQ8VHP8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab40bQ8VHP8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab40bQ8VHP8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms