Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Gm45102-201ENSMUST00000207427 857 ntBASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Gm9959-201ENSMUST00000068277 390 ntBASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rpa1Q8VEE4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpa1Q8VEE4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
Rpa1Q8VEE4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpa1Q8VEE4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpa1Q8VEE4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rpa1Q8VEE4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpa1Q8VEE4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.74■□□□□ 0.59
Rpa1Q8VEE4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rpa1Q8VEE4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa1Q8VEE4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.71■□□□□ 0.59
Rpa1Q8VEE4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms