Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retreg1dQ8VE91 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retreg1dQ8VE91 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg1dQ8VE91 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg1dQ8VE91 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retreg1dQ8VE91 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
Retreg1dQ8VE91 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.39■□□□□ 0.54
Retreg1dQ8VE91 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retreg1dQ8VE91 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retreg1dQ8VE91 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retreg1dQ8VE91 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg1dQ8VE91 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg1dQ8VE91 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg1dQ8VE91 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg1dQ8VE91 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg1dQ8VE91 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Retreg1dQ8VE91 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms