Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rprd1aQ8VDS4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rprd1aQ8VDS4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.17■□□□□ 0.66
Rprd1aQ8VDS4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rprd1aQ8VDS4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rprd1aQ8VDS4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rprd1aQ8VDS4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rprd1aQ8VDS4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rprd1aQ8VDS4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rprd1aQ8VDS4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rprd1aQ8VDS4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rprd1aQ8VDS4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rprd1aQ8VDS4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rprd1aQ8VDS4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rprd1aQ8VDS4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms