Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf8Q8VC56 BC021767-201ENSMUST00000126387 1716 ntBASIC17.95■□□□□ 0.46
Rnf8Q8VC56 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Gm40848-201ENSMUST00000221998 324 ntBASIC17.94■□□□□ 0.46
Rnf8Q8VC56 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.94■□□□□ 0.46
Rnf8Q8VC56 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rnf8Q8VC56 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf8Q8VC56 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Rarb-207ENSMUST00000225921 2756 ntBASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf8Q8VC56 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.9■□□□□ 0.46
Rnf8Q8VC56 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf8Q8VC56 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms