Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vmn1r28Q8R2C9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Vmn1r28Q8R2C9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vmn1r28Q8R2C9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.11■□□□□ 0.33
Vmn1r28Q8R2C9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vmn1r28Q8R2C9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vmn1r28Q8R2C9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r28Q8R2C9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Vmn1r28Q8R2C9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r28Q8R2C9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vmn1r28Q8R2C9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vmn1r28Q8R2C9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vmn1r28Q8R2C9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms