Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Mir5122-201ENSMUST00000175004 89 ntBASIC18.34■□□□□ 0.53
Alms1Q8K4E0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Alms1Q8K4E0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.33■□□□□ 0.53
Alms1Q8K4E0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alms1Q8K4E0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.33■□□□□ 0.53
Alms1Q8K4E0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.33■□□□□ 0.53
Alms1Q8K4E0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alms1Q8K4E0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.33■□□□□ 0.52
Alms1Q8K4E0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Alms1Q8K4E0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Gm2399-201ENSMUST00000104944 225 ntBASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Alms1Q8K4E0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alms1Q8K4E0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Alms1Q8K4E0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Gm9987-201ENSMUST00000069768 567 ntBASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alms1Q8K4E0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Alms1Q8K4E0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.27■□□□□ 0.52
Alms1Q8K4E0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Alms1Q8K4E0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alms1Q8K4E0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alms1Q8K4E0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms