Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cystm1Q8K353 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC11.69□□□□□ -0.54
Cystm1Q8K353 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.69□□□□□ -0.54
Cystm1Q8K353 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.69□□□□□ -0.54
Cystm1Q8K353 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cystm1Q8K353 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.68□□□□□ -0.54
Cystm1Q8K353 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cystm1Q8K353 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.67□□□□□ -0.54
Cystm1Q8K353 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cystm1Q8K353 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cystm1Q8K353 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cystm1Q8K353 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC11.66□□□□□ -0.54
Cystm1Q8K353 Gm21956-201ENSMUST00000179946 522 ntBASIC11.66□□□□□ -0.54
Cystm1Q8K353 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.66□□□□□ -0.54
Cystm1Q8K353 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cystm1Q8K353 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cystm1Q8K353 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cystm1Q8K353 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cystm1Q8K353 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.65□□□□□ -0.54
Cystm1Q8K353 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.65□□□□□ -0.54
Cystm1Q8K353 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms