Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.18■□□□□ 0.82
Trim68Q8K243 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
Trim68Q8K243 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim68Q8K243 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.18■□□□□ 0.82
Trim68Q8K243 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim68Q8K243 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim68Q8K243 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.17■□□□□ 0.82
Trim68Q8K243 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.17■□□□□ 0.82
Trim68Q8K243 Rab3c-203ENSMUST00000224180 967 ntBASIC20.17■□□□□ 0.82
Trim68Q8K243 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim68Q8K243 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim68Q8K243 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim68Q8K243 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.16■□□□□ 0.82
Trim68Q8K243 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim68Q8K243 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim68Q8K243 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim68Q8K243 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim68Q8K243 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim68Q8K243 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.15■□□□□ 0.82
Trim68Q8K243 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim68Q8K243 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Trim68Q8K243 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim68Q8K243 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim68Q8K243 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim68Q8K243 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim68Q8K243 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Trim68Q8K243 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim68Q8K243 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.13■□□□□ 0.81
Trim68Q8K243 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim68Q8K243 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim68Q8K243 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim68Q8K243 Gm12896-201ENSMUST00000118430 226 ntBASIC20.12■□□□□ 0.81
Trim68Q8K243 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim68Q8K243 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim68Q8K243 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim68Q8K243 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim68Q8K243 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim68Q8K243 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms