Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Snrnp27Q8K194 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.45■□□□□ 0.54
Snrnp27Q8K194 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Snrnp27Q8K194 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.43■□□□□ 0.54
Snrnp27Q8K194 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Gm13234-201ENSMUST00000120010 747 ntBASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.42■□□□□ 0.54
Snrnp27Q8K194 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp27Q8K194 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Gm10653-202ENSMUST00000139570 835 ntBASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp27Q8K194 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp27Q8K194 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp27Q8K194 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp27Q8K194 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.4■□□□□ 0.54
Snrnp27Q8K194 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Snrnp27Q8K194 Gm20760-201ENSMUST00000179197 648 ntBASIC18.4■□□□□ 0.54
Snrnp27Q8K194 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms