Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h3Q8CHP0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.39■□□□□ 0.53
Zc3h3Q8CHP0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h3Q8CHP0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Zc3h3Q8CHP0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zc3h3Q8CHP0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Gm42545-201ENSMUST00000202755 922 ntBASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Gm18025-201ENSMUST00000221733 862 ntBASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zc3h3Q8CHP0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zc3h3Q8CHP0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Gm18032-201ENSMUST00000222541 538 ntBASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zc3h3Q8CHP0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Gm10138-203ENSMUST00000206952 366 ntBASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zc3h3Q8CHP0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zc3h3Q8CHP0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zc3h3Q8CHP0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Zc3h3Q8CHP0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zc3h3Q8CHP0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Zc3h3Q8CHP0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.33■□□□□ 0.53
Zc3h3Q8CHP0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zc3h3Q8CHP0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Gm37292-201ENSMUST00000192062 758 ntBASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Zc3h3Q8CHP0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms