Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rdh1Q8CGV4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rdh1Q8CGV4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rdh1Q8CGV4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh1Q8CGV4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh1Q8CGV4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh1Q8CGV4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh1Q8CGV4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh1Q8CGV4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.14■□□□□ 0.49
Rdh1Q8CGV4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh1Q8CGV4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh1Q8CGV4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh1Q8CGV4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms