Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Calcoco1Q8CGU1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Calcoco1Q8CGU1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Calcoco1Q8CGU1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Gm6139-201ENSMUST00000079261 882 ntBASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Calcoco1Q8CGU1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Calcoco1Q8CGU1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Gm12251-201ENSMUST00000117893 792 ntBASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Serp2-204ENSMUST00000228055 705 ntBASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Calcoco1Q8CGU1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Calcoco1Q8CGU1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Calcoco1Q8CGU1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calcoco1Q8CGU1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Calcoco1Q8CGU1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Calcoco1Q8CGU1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.33■□□□□ 0.69
Calcoco1Q8CGU1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms