Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rp1l1Q8CGM2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Timm23-208ENSMUST00000226683 750 ntBASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rp1l1Q8CGM2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.66■□□□□ 0.74
Rp1l1Q8CGM2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.66■□□□□ 0.74
Rp1l1Q8CGM2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1l1Q8CGM2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1l1Q8CGM2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rp1l1Q8CGM2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Odf3b-204ENSMUST00000227834 930 ntBASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rp1l1Q8CGM2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rp1l1Q8CGM2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rp1l1Q8CGM2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rp1l1Q8CGM2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rp1l1Q8CGM2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rp1l1Q8CGM2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Gm18032-201ENSMUST00000222541 538 ntBASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rp1l1Q8CGM2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Gm23634-201ENSMUST00000175071 91 ntBASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Gm6345-202ENSMUST00000180900 204 ntBASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rp1l1Q8CGM2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rp1l1Q8CGM2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms