Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ShfQ8CG80 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ShfQ8CG80 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.66■□□□□ 0.26
ShfQ8CG80 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.66■□□□□ 0.26
ShfQ8CG80 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.66■□□□□ 0.26
ShfQ8CG80 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ShfQ8CG80 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShfQ8CG80 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.65■□□□□ 0.26
ShfQ8CG80 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.65■□□□□ 0.26
ShfQ8CG80 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ShfQ8CG80 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ShfQ8CG80 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShfQ8CG80 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ShfQ8CG80 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ShfQ8CG80 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ShfQ8CG80 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ShfQ8CG80 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShfQ8CG80 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
ShfQ8CG80 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.63■□□□□ 0.25
ShfQ8CG80 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.63■□□□□ 0.25
ShfQ8CG80 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ShfQ8CG80 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShfQ8CG80 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.62■□□□□ 0.25
ShfQ8CG80 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ShfQ8CG80 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShfQ8CG80 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
ShfQ8CG80 Gm12821-201ENSMUST00000120022 600 ntBASIC16.61■□□□□ 0.25
ShfQ8CG80 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.61■□□□□ 0.25
ShfQ8CG80 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ShfQ8CG80 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ShfQ8CG80 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms