Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx6Q8C7R7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx6Q8C7R7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx6Q8C7R7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.92■□□□□ 0.62
Rfx6Q8C7R7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Smad6-203ENSMUST00000179458 273 ntBASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rfx6Q8C7R7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms