Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Gm15378-201ENSMUST00000121894 207 ntBASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ptcd1Q8C2E4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptcd1Q8C2E4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Mir1199-201ENSMUST00000117015 119 ntBASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Gm44549-201ENSMUST00000208351 577 ntBASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.02■■□□□ 1.28
Ptcd1Q8C2E4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Ptcd1Q8C2E4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptcd1Q8C2E4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptcd1Q8C2E4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ptcd1Q8C2E4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Gm2399-201ENSMUST00000104944 225 ntBASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptcd1Q8C2E4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptcd1Q8C2E4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ptcd1Q8C2E4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptcd1Q8C2E4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptcd1Q8C2E4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ptcd1Q8C2E4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.96■■□□□ 1.27
Ptcd1Q8C2E4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms