Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf2Q8BZT2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf2Q8BZT2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf2Q8BZT2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf2Q8BZT2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf2Q8BZT2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf2Q8BZT2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh3rf2Q8BZT2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Gm10812-201ENSMUST00000099864 546 ntBASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf2Q8BZT2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh3rf2Q8BZT2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms