Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube3dQ8BX13 BC021767-201ENSMUST00000126387 1716 ntBASIC16.53■□□□□ 0.24
Ube3dQ8BX13 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ube3dQ8BX13 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Ube3dQ8BX13 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.51■□□□□ 0.23
Ube3dQ8BX13 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ube3dQ8BX13 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ube3dQ8BX13 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ube3dQ8BX13 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms