Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdk5rap1Q8BTW8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdk5rap1Q8BTW8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.71■□□□□ 0.42
Cdk5rap1Q8BTW8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdk5rap1Q8BTW8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cdk5rap1Q8BTW8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdk5rap1Q8BTW8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.69■□□□□ 0.42
Cdk5rap1Q8BTW8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdk5rap1Q8BTW8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdk5rap1Q8BTW8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms