Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhlrc1Q8BR37 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Gm12527-201ENSMUST00000117967 564 ntBASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Gm20049-201ENSMUST00000219950 730 ntBASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.44□□□□□ -0.1
Nhlrc1Q8BR37 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc1Q8BR37 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Rab3c-203ENSMUST00000224180 967 ntBASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc1Q8BR37 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nhlrc1Q8BR37 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc1Q8BR37 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms