Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cpsf4Q8BQZ5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.09■□□□□ 0.49
Cpsf4Q8BQZ5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf4Q8BQZ5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Gm9988-201ENSMUST00000069786 435 ntBASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.08■□□□□ 0.48
Cpsf4Q8BQZ5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cpsf4Q8BQZ5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gm10033-202ENSMUST00000211874 928 ntBASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.06■□□□□ 0.48
Cpsf4Q8BQZ5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4Q8BQZ5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf4Q8BQZ5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms