Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip4Q8BQP8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.63■□□□□ 0.89
Rab11fip4Q8BQP8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip4Q8BQP8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip4Q8BQP8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Gm7860-201ENSMUST00000121190 879 ntBASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab11fip4Q8BQP8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab11fip4Q8BQP8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rab11fip4Q8BQP8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab11fip4Q8BQP8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rab11fip4Q8BQP8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Mir5133-201ENSMUST00000174955 77 ntBASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Gm38205-201ENSMUST00000192243 258 ntBASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab11fip4Q8BQP8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab11fip4Q8BQP8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms