Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Scn3bQ8BHK2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn3bQ8BHK2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn3bQ8BHK2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn3bQ8BHK2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn3bQ8BHK2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn3bQ8BHK2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn3bQ8BHK2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn3bQ8BHK2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn3bQ8BHK2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn3bQ8BHK2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn3bQ8BHK2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn3bQ8BHK2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Serp2-204ENSMUST00000228055 705 ntBASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms