Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clrn3Q8BHH8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.38
Clrn3Q8BHH8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Gm9988-201ENSMUST00000069786 435 ntBASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Clrn3Q8BHH8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clrn3Q8BHH8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clrn3Q8BHH8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Clrn3Q8BHH8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms