Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SpidrQ8BGX7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Gm13836-201ENSMUST00000121159 501 ntBASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Flg-201ENSMUST00000050758 1488 ntBASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.87■■□□□ 1.09
SpidrQ8BGX7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SpidrQ8BGX7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Gm37055-201ENSMUST00000191866 133 ntBASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SpidrQ8BGX7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Gm15565-201ENSMUST00000118890 427 ntBASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SpidrQ8BGX7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SpidrQ8BGX7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SpidrQ8BGX7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SpidrQ8BGX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SpidrQ8BGX7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SpidrQ8BGX7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SpidrQ8BGX7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SpidrQ8BGX7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms