Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.6■□□□□ 0.41
Atg4bQ8BGE6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Gm7514-201ENSMUST00000209475 934 ntBASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4bQ8BGE6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4bQ8BGE6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4bQ8BGE6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4bQ8BGE6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4bQ8BGE6 Gm10849-201ENSMUST00000100397 618 ntBASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4bQ8BGE6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Atg4bQ8BGE6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Gm42569-201ENSMUST00000200539 472 ntBASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.56■□□□□ 0.4
Atg4bQ8BGE6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Gm6420-201ENSMUST00000193885 723 ntBASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms