Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Trim65Q8BFW4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Gm13534-201ENSMUST00000121169 513 ntBASIC20.02■□□□□ 0.8
Trim65Q8BFW4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim65Q8BFW4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.02■□□□□ 0.79
Trim65Q8BFW4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim65Q8BFW4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trim65Q8BFW4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20■□□□□ 0.79
Trim65Q8BFW4 Gm42642-201ENSMUST00000200683 355 ntBASIC20■□□□□ 0.79
Trim65Q8BFW4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim65Q8BFW4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim65Q8BFW4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim65Q8BFW4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim65Q8BFW4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim65Q8BFW4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim65Q8BFW4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim65Q8BFW4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim65Q8BFW4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms