Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf1Q811I0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf1Q811I0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atpaf1Q811I0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf1Q811I0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atpaf1Q811I0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atpaf1Q811I0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atpaf1Q811I0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Atpaf1Q811I0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atpaf1Q811I0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atpaf1Q811I0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Gm43530-201ENSMUST00000195920 274 ntBASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.22■□□□□ 0.03
Atpaf1Q811I0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atpaf1Q811I0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms