Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.89■□□□□ 0.45
Otop1Q80VM9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Otop1Q80VM9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.88■□□□□ 0.45
Otop1Q80VM9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Otop1Q80VM9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.87■□□□□ 0.45
Otop1Q80VM9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.87■□□□□ 0.45
Otop1Q80VM9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.87■□□□□ 0.45
Otop1Q80VM9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Otop1Q80VM9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Otop1Q80VM9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.86■□□□□ 0.45
Otop1Q80VM9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.86■□□□□ 0.45
Otop1Q80VM9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Otop1Q80VM9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.85■□□□□ 0.45
Otop1Q80VM9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.85■□□□□ 0.45
Otop1Q80VM9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Otop1Q80VM9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.84■□□□□ 0.45
Otop1Q80VM9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Otop1Q80VM9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Otop1Q80VM9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Otop1Q80VM9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.83■□□□□ 0.44
Otop1Q80VM9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Otop1Q80VM9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Otop1Q80VM9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms