Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3tc2Q80VA5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3tc2Q80VA5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3tc2Q80VA5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Sh3tc2Q80VA5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3tc2Q80VA5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Sh3tc2Q80VA5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Gm2559-201ENSMUST00000201323 363 ntBASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc2Q80VA5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc2Q80VA5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc2Q80VA5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Gm715-201ENSMUST00000117865 831 ntBASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc2Q80VA5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc2Q80VA5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc2Q80VA5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh3tc2Q80VA5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh3tc2Q80VA5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms