Protein–RNA interactions for Protein: Q80UN9

Trit1, tRNA dimethylallyltransferase, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trit1Q80UN9 Gm2399-201ENSMUST00000104944 225 ntBASIC19.72■□□□□ 0.75
Trit1Q80UN9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trit1Q80UN9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Trit1Q80UN9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.72■□□□□ 0.75
Trit1Q80UN9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trit1Q80UN9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.71■□□□□ 0.75
Trit1Q80UN9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trit1Q80UN9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.71■□□□□ 0.75
Trit1Q80UN9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trit1Q80UN9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Trit1Q80UN9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trit1Q80UN9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.7■□□□□ 0.74
Trit1Q80UN9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trit1Q80UN9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.69■□□□□ 0.74
Trit1Q80UN9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trit1Q80UN9 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.69■□□□□ 0.74
Trit1Q80UN9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.69■□□□□ 0.74
Trit1Q80UN9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trit1Q80UN9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.68■□□□□ 0.74
Trit1Q80UN9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trit1Q80UN9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.67■□□□□ 0.74
Trit1Q80UN9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trit1Q80UN9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trit1Q80UN9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trit1Q80UN9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trit1Q80UN9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms