Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh19Q80TF3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh19Q80TF3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh19Q80TF3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh19Q80TF3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh19Q80TF3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh19Q80TF3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh19Q80TF3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh19Q80TF3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms