Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pif1Q80SX8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.17■□□□□ 0.34
Pif1Q80SX8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.17■□□□□ 0.34
Pif1Q80SX8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pif1Q80SX8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.15■□□□□ 0.34
Pif1Q80SX8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pif1Q80SX8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pif1Q80SX8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.15■□□□□ 0.34
Pif1Q80SX8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pif1Q80SX8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.13■□□□□ 0.33
Pif1Q80SX8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pif1Q80SX8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Pif1Q80SX8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Dio3-201ENSMUST00000097228 1449 ntBASIC17.12■□□□□ 0.33
Pif1Q80SX8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pif1Q80SX8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms