Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Exosc3Q7TQK4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Exosc3Q7TQK4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Exosc3Q7TQK4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.14■□□□□ 0.34
Exosc3Q7TQK4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Exosc3Q7TQK4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Exosc3Q7TQK4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Gm37179-201ENSMUST00000194862 823 ntBASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Exosc3Q7TQK4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.11■□□□□ 0.33
Exosc3Q7TQK4 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 163.7 ms